Issues

• Preferred alignment for CDS glyph

  SynBioDex/SBOL-visual#177 · Filter by author fxbuson opened on Sep 17, 2026
  10

  

• Process-Interaction Glyph is missing in the visual SBOL 3.0 release

  SynBioDex/SBOL-visual#176 · Filter by author PrashantVaidyanathan opened on May 22, 2026

• Voting for SEP_V026 | Introduction of “//” as a Glyph for Generic DNA Breaks in SBOL Visual

  ready for voteSEP
  SynBioDex/SBOL-visual#172 · Filter by author ERIK-KE opened on Mar 10, 2026
  3

• Glyphs bounding box

  bug
  SynBioDex/SBOL-visual#170 · Filter by author ERIK-KE opened on Oct 15, 2025

• 5' and 3' untranslated regions for eukaryotic parts

  Draft
  SynBioDex/SBOL-visual#169 · Filter by author fxbuson opened on Nov 3, 2023 · SBOL Visual 3.1
  5

  

• Representation of introns in non-CDS regions

  Draft
  SynBioDex/SBOL-visual#168 · Filter by author fxbuson opened on Nov 2, 2023 · SBOL Visual 3.1
  10

  

• Usage of protein feature glyphs in combination with CDSs

  Draft
  SynBioDex/SBOL-visual#167 · Filter by author shyambhakta opened on Nov 2, 2023 · SBOL Visual 3.1
  15

  

• SEP V025: Handle nucleic acid parts with overlapping sequences

  DraftSEP
  SynBioDex/SBOL-visual#165 · Filter by author chofski opened on Oct 7, 2022 · SBOL Visual 3.1
  10

  

• Glyphs not very legible

  bug
  SynBioDex/SBOL-visual#164 · Filter by author cjmyers opened on Mar 15, 2022

• Many GenBank feature types do not have SBOL Visual Glyphs

  SynBioDex/SBOL-visual#159 · Filter by author cjmyers opened on Mar 29, 2021 · Future Tasks
  4

• Incomplete set of examples

  SynBioDex/SBOL-visual#158 · Filter by author jamesscottbrown opened on Mar 26, 2021 · SBOL Visual 3.1
  2

• Abstract classes should not link to syntax descriptors

  bugontology
  SynBioDex/SBOL-visual#152 · Filter by author jakebeal opened on Mar 25, 2021
  

• Representation of constraints

  SynBioDex/SBOL-visual#150 · Filter by author jakebeal opened on Mar 24, 2021 · SBOL Visual 3.1

• Are Complex examples specifications?

  ontology
  SynBioDex/SBOL-visual#136 · Filter by author jakebeal opened on Dec 1, 2020

• What aspects of parametric glyphs should go into the ontology?

  ontology
  SynBioDex/SBOL-visual#118 · Filter by author jakebeal opened on Oct 23, 2020 · Future Tasks
  4

• Access to old and pre-release ontology variants

  automationontology
  SynBioDex/SBOL-visual#117 · Filter by author jakebeal opened on Oct 23, 2020
  2

  

• Generate and validate ontology on GitHub push

  automationontology
  SynBioDex/SBOL-visual#116 · Filter by author jakebeal opened on Oct 23, 2020
  1

  

• Automate generation of font from glyph collection

  automation
  SynBioDex/SBOL-visual#115 · Filter by author jakebeal opened on Oct 23, 2020
  

• Gene and Gene Group / Locus Glyph

  SynBioDex/SBOL-visual#113 · Filter by author shyambhakta opened on Oct 23, 2020 · SBOL Visual 3.1
  19

  

• Should multi-head arrows be allowed to have different heads?

  SynBioDex/SBOL-visual#112 · Filter by author jakebeal opened on Oct 18, 2020 · SBOL Visual 3.1

• SEP V023: SBOL Visual specification change workflow

  DraftSEP
  SynBioDex/SBOL-visual#109 · Filter by author jakebeal opened on Oct 9, 2020
  12

• Integrate font with ontology

  ontology
  SynBioDex/SBOL-visual#98 · Filter by author jakebeal opened on Aug 17, 2020
  2

• Ontology should have non-specification glyphs and SVGs too

  ontology
  SynBioDex/SBOL-visual#95 · Filter by author jakebeal opened on Apr 20, 2020
  5

  

• Parametric SVG

  enhancement
  SynBioDex/SBOL-visual#89 · Filter by author jakebeal opened on Jan 27, 2020 · Future Tasks
  1

  

• Functional RNA Glyphs

  SynBioDex/SBOL-visual#79 · Filter by author jblucks opened on Oct 29, 2019 · Future Tasks
  4