networks.rst

github_url:	https://github.com/Project-MONAI/MONAI

Network architectures

Blocks

.. automodule:: monai.networks.blocks

.. currentmodule:: monai.networks.blocks

ADN

.. autoclass:: ADN
    :members:

Convolution

.. autoclass:: Convolution
    :members:

CRF

.. autoclass:: CRF
    :members:

ResidualUnit

.. autoclass:: ResidualUnit
    :members:

Swish

.. autoclass:: Swish
    :members:

MemoryEfficientSwish

.. autoclass:: MemoryEfficientSwish
    :members:

FPN

.. autoclass:: ExtraFPNBlock
    :members:

.. autoclass:: FeaturePyramidNetwork
    :members:

.. autoclass:: LastLevelMaxPool
    :members:

.. autoclass:: LastLevelP6P7
    :members:

.. autoclass:: BackboneWithFPN
    :members:

Mish

.. autoclass:: Mish
    :members:

GEGLU

.. autoclass:: GEGLU
    :members:

GCN Module

.. autoclass:: GCN
    :members:

Refinement Module

.. autoclass:: Refine
    :members:

FCN Module

.. autoclass:: FCN
    :members:

Multi-Channel FCN Module

.. autoclass:: MCFCN
    :members:

Dynamic-Unet Block

.. autoclass:: UnetResBlock
    :members:

.. autoclass:: UnetBasicBlock
    :members:

.. autoclass:: UnetUpBlock
    :members:

.. autoclass:: UnetOutBlock
    :members:

DenseBlock

.. autoclass:: DenseBlock
   :members:

MedNeXtBlock

.. autoclass:: MedNeXtBlock
    :members:

SegResnet Block

.. autoclass:: ResBlock
    :members:

SABlock Block

.. autoclass:: SABlock
    :members:

CABlock Block

.. autoclass:: CABlock
    :members:

FeedForward Block

.. autoclass:: FeedForward
    :members:

Squeeze-and-Excitation

.. autoclass:: ChannelSELayer
    :members:

Transformer Block

.. autoclass:: TransformerBlock
    :members:

Hyena Mixer

.. autoclass:: HyenaMixer
    :members:

Hyena Transformer Block

.. autoclass:: HyenaTransformerBlock
    :members:

Depthwise FFT Convolution

.. autoclass:: DepthwiseFFTConv2d
    :members:

.. autoclass:: DepthwiseFFTConv3d
    :members:

UNETR Block

.. autoclass:: UnetrBasicBlock
    :members:

.. autoclass:: UnetrUpBlock
    :members:

.. autoclass:: UnetrPrUpBlock
    :members:

Residual Squeeze-and-Excitation

.. autoclass:: ResidualSELayer
    :members:

Squeeze-and-Excitation Block

.. autoclass:: SEBlock
    :members:

Squeeze-and-Excitation Bottleneck

.. autoclass:: SEBottleneck
    :members:

Squeeze-and-Excitation Resnet Bottleneck

.. autoclass:: SEResNetBottleneck
    :members:

Squeeze-and-Excitation ResNeXt Bottleneck

.. autoclass:: SEResNeXtBottleneck
    :members:

Simple ASPP

.. autoclass:: SimpleASPP
    :members:

MaxAvgPooling

.. autoclass:: MaxAvgPool
    :members:

Upsampling

.. autoclass:: UpSample
    :members:

.. autoclass:: Upsample

.. autoclass:: SubpixelUpsample
    :members:

.. autoclass:: Subpixelupsample

.. autoclass:: SubpixelUpSample

Downsampling

.. autoclass:: DownSample
    :members:

.. autoclass:: Downsample

.. autoclass:: SubpixelDownsample
    :members:

.. autoclass:: Subpixeldownsample

.. autoclass:: SubpixelDownSample

Registration Residual Conv Block

.. autoclass:: RegistrationResidualConvBlock
    :members:

Registration Down Sample Block

.. autoclass:: RegistrationDownSampleBlock
    :members:

Registration Extraction Block

.. autoclass:: RegistrationExtractionBlock
    :members:

LocalNet DownSample Block

.. autoclass:: LocalNetDownSampleBlock
    :members:

LocalNet UpSample Block

.. autoclass:: LocalNetUpSampleBlock
    :members:

LocalNet Feature Extractor Block

.. autoclass:: LocalNetFeatureExtractorBlock
    :members:

MLP Block

.. autoclass:: MLPBlock
    :members:

Patch Embedding Block

.. autoclass:: PatchEmbeddingBlock
    :members:

FactorizedIncreaseBlock

.. autoclass:: FactorizedIncreaseBlock
    :members:

FactorizedReduceBlock

.. autoclass:: FactorizedReduceBlock
    :members:

P3DActiConvNormBlock

.. autoclass:: P3DActiConvNormBlock
    :members:

ActiConvNormBlock

.. autoclass:: ActiConvNormBlock
    :members:

Warp

.. autoclass:: Warp
    :members:

DVF2DDF

.. autoclass:: DVF2DDF
    :members:

VarNetBlock

.. autoclass:: monai.apps.reconstruction.networks.blocks.varnetblock.VarNetBlock
   :members:

N-Dim Fourier Transform

.. automodule:: monai.networks.blocks.fft_utils_t

.. autofunction:: monai.networks.blocks.fft_utils_t.fftn_centered_t

.. autofunction:: monai.networks.blocks.fft_utils_t.ifftn_centered_t

.. autofunction:: monai.networks.blocks.fft_utils_t.roll

.. autofunction:: monai.networks.blocks.fft_utils_t.roll_1d

.. autofunction:: monai.networks.blocks.fft_utils_t.fftshift

.. autofunction:: monai.networks.blocks.fft_utils_t.ifftshift

Layers

Factories

.. automodule:: monai.networks.layers.factories

.. autoclass:: monai.networks.layers.LayerFactory
  :members:

.. currentmodule:: monai.networks.layers

split_args

.. autofunction:: monai.networks.layers.split_args

Dropout

.. automodule:: monai.networks.layers.Dropout
  :members:

Act

.. automodule:: monai.networks.layers.Act
  :members:

Norm

.. automodule:: monai.networks.layers.Norm
  :members:

Conv

.. automodule:: monai.networks.layers.Conv
  :members:

Pad

.. automodule:: monai.networks.layers.Pad
  :members:

Pool

.. automodule:: monai.networks.layers.Pool
  :members:

.. currentmodule:: monai.networks.layers

ChannelPad

.. autoclass:: ChannelPad
    :members:

SkipConnection

.. autoclass:: SkipConnection
    :members:

Flatten

.. autoclass:: Flatten
    :members:

Reshape

.. autoclass:: Reshape
    :members:

separable_filtering

.. autofunction:: separable_filtering

apply_filter

.. autofunction:: apply_filter

GaussianFilter

.. autoclass:: GaussianFilter
    :members:

MedianFilter

.. autoclass:: MedianFilter
    :members:

median_filter

.. autoclass:: median_filter
    :members:

BilateralFilter

.. autoclass:: BilateralFilter
    :members:

TrainableBilateralFilter

.. autoclass:: TrainableBilateralFilter
    :members:

TrainableJointBilateralFilter

.. autoclass:: TrainableJointBilateralFilter
    :members:

PHLFilter

.. autoclass:: PHLFilter

GaussianMixtureModel

.. autoclass:: GaussianMixtureModel

SavitzkyGolayFilter

.. autoclass:: SavitzkyGolayFilter
    :members:

HilbertTransform

.. autoclass:: HilbertTransform
    :members:

Affine Transform

.. autoclass:: monai.networks.layers.AffineTransform
    :members:

grid_pull

.. autofunction:: monai.networks.layers.grid_pull

grid_push

.. autofunction:: monai.networks.layers.grid_push

grid_count

.. autofunction:: monai.networks.layers.grid_count

grid_grad

.. autofunction:: monai.networks.layers.grid_grad

LLTM

.. autoclass:: LLTM
    :members:

ConjugateGradient

.. autoclass:: ConjugateGradient
    :members:

Utilities

.. automodule:: monai.networks.layers.convutils
    :members:

.. automodule:: monai.networks.layers.utils
    :members:

Nets

.. currentmodule:: monai.networks.nets

AHNet

.. autoclass:: AHNet
  :members:

DenseNet

.. autoclass:: DenseNet
  :members:

DenseNet121

.. autoclass:: DenseNet121

DenseNet169

.. autoclass:: DenseNet169

DenseNet201

.. autoclass:: DenseNet201

DenseNet264

.. autoclass:: DenseNet264

EfficientNet

.. autoclass:: EfficientNet
  :members:

BlockArgs

.. autoclass:: BlockArgs
  :members:

EfficientNetBN

.. autoclass:: EfficientNetBN
  :members:

EfficientNetBNFeatures

.. autoclass:: EfficientNetBNFeatures
  :members:

SegResNet

.. autoclass:: SegResNet
  :members:

SegResNetDS

.. autoclass:: SegResNetDS
  :members:

SegResNetDS2

.. autoclass:: SegResNetDS2
  :members:

SegResNetVAE

.. autoclass:: SegResNetVAE
  :members:

ResNet

.. autoclass:: ResNet
  :members:

ResNetFeatures

.. autoclass:: ResNetFeatures
  :members:

SENet

.. autoclass:: SENet
  :members:

SENet154

.. autoclass:: SENet154

SEResNet50

.. autoclass:: SEResNet50

SEResNet101

.. autoclass:: SEResNet101

SEResNet152

.. autoclass:: SEResNet152

SEResNext50

.. autoclass:: SEResNext50

SEResNext101

.. autoclass:: SEResNext101

HighResNet

.. autoclass:: HighResNet
  :members:

.. autoclass:: HighResBlock
  :members:

DynUNet

.. autoclass:: DynUNet
  :members:

.. autoclass:: DynUnet

.. autoclass:: Dynunet

UNet

.. autoclass:: UNet
  :members:

.. autoclass:: Unet

.. autoclass:: unet

AttentionUnet

.. autoclass:: AttentionUnet
  :members:

UNETR

.. autoclass:: UNETR
    :members:

VISTA3D

.. autoclass:: VISTA3D
    :members:

SwinUNETR

.. autoclass:: SwinUNETR
    :members:

HyenaNDUNETR

.. autoclass:: HyenaNDUNETR
    :members:

BasicUNet

.. autoclass:: BasicUNet
  :members:

.. autoclass:: BasicUnet

.. autoclass:: Basicunet

BasicUNetPlusPlus

.. autoclass:: BasicUNetPlusPlus
  :members:

.. autoclass:: BasicUnetPlusPlus

.. autoclass:: BasicunetPlusPlus

FlexibleUNet

.. autoclass:: FlexibleUNet
  :members:

VNet

.. autoclass:: VNet
  :members:

RegUNet

.. autoclass:: RegUNet
  :members:

GlobalNet

.. autoclass:: GlobalNet
  :members:

LocalNet

.. autoclass:: LocalNet
  :members:

AutoEncoder

.. autoclass:: AutoEncoder
  :members:

VarAutoEncoder

.. autoclass:: VarAutoEncoder
  :members:

NaViT

.. autoclass:: NaViT
  :members:

ViT

.. autoclass:: ViT
  :members:

Restormer

.. autoclass:: restormer
  :members:

ViTAutoEnc

.. autoclass:: ViTAutoEnc
  :members:

MaskedAutoEncoderViT

.. autoclass:: MaskedAutoEncoderViT
  :members:

FullyConnectedNet

.. autoclass:: FullyConnectedNet
  :members:

VarFullyConnectedNet

.. autoclass:: VarFullyConnectedNet
  :members:

Generator

.. autoclass:: Generator
  :members:

Regressor

.. autoclass:: Regressor
  :members:

Classifier

.. autoclass:: Classifier
  :members:

Discriminator

.. autoclass:: Discriminator
  :members:

Critic

.. autoclass:: Critic
  :members:

Transchex

.. autoclass:: Transchex
  :members:

NetAdapter

.. autoclass:: NetAdapter
  :members:

TorchVisionFCModel

.. autoclass:: TorchVisionFCModel
  :members:

MILModel

.. autoclass:: MILModel
  :members:

DiNTS

.. autoclass:: DiNTS
  :members:

TopologyConstruction for DiNTS

.. autoclass:: TopologyConstruction
  :members:

TopologyInstance for DiNTS

.. autoclass:: TopologyInstance
  :members:

TopologySearch for DiNTS

.. autoclass:: TopologySearch
  :members:

ComplexUnet

.. autoclass:: monai.apps.reconstruction.networks.nets.complex_unet.ComplexUnet
   :members:

CoilSensitivityModel

.. autoclass:: monai.apps.reconstruction.networks.nets.coil_sensitivity_model.CoilSensitivityModel
   :members:

e2e-VarNet

.. autoclass:: monai.apps.reconstruction.networks.nets.varnet.VariationalNetworkModel
   :members:

DAF3D

.. autoclass:: DAF3D
   :members:

Quicknat

.. autoclass:: Quicknat
   :members:

VoxelMorph

.. autoclass:: VoxelMorphUNet
   :members:

.. autoclass:: VoxelMorph
   :members:

MedNeXt

.. autoclass:: MedNeXt
   :members:

Utilities

.. automodule:: monai.networks.utils
  :members:

.. automodule:: monai.apps.reconstruction.networks.nets.utils
  :members:

Noise Schedulers

.. automodule:: monai.networks.schedulers

.. currentmodule:: monai.networks.schedulers

Scheduler

.. autoclass:: Scheduler
  :members:

NoiseSchedules

.. autoclass:: NoiseSchedules
  :members:

DDPMScheduler

.. autoclass:: DDPMScheduler
  :members:

DDIMScheduler

.. autoclass:: DDIMScheduler
  :members:

PNDMScheduler

.. autoclass:: PNDMScheduler
  :members:

RFlowScheduler

.. autoclass:: RFlowScheduler
  :members: